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Interspecific Gene Flow Shaped the Evolution of the Genus Canis

2018-11Artigo científico Acesso aberto
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dc.contributor.authorGopalakrishnan, Shyam
dc.contributor.authorSinding, Mikkel-Holger S.
dc.contributor.authorRamos-Madrigal, Jazmín
dc.contributor.authorNiemann, Jonas
dc.contributor.authorSamaniego Castruita, Jose A.
dc.contributor.authorVieira, Filipe G.
dc.contributor.authorCarøe, Christian
dc.contributor.authorMontero, Marc de Manuel
dc.contributor.authorKuderna, Lukas
dc.contributor.authorSerres, Aitor
dc.contributor.authorGonzález-Basallote, Víctor Manuel
dc.contributor.authorLiu, Yan-Hu
dc.contributor.authorWang, Guo-Dong
dc.contributor.authorMarques-Bonet, Tomas
dc.contributor.authorMirarab, Siavash
dc.contributor.authorFernandes, C
dc.contributor.authorGaubert, Philippe
dc.contributor.authorKoepfli, Klaus-Peter
dc.contributor.authorBudd, Jane
dc.contributor.authorRueness, Eli Knispel
dc.contributor.authorSillero, Claudio
dc.contributor.authorHeide-Jørgensen, Mads Peter
dc.contributor.authorPetersen, Bent
dc.contributor.authorSicheritz-Ponten, Thomas
dc.contributor.authorBachmann, Lutz
dc.contributor.authorWiig, Øystein
dc.contributor.authorHansen, Anders J.
dc.contributor.authorGilbert, M. Thomas P.
dc.date.accessioned2024-01-25T11:26:38Z
dc.date.available2024-01-25T11:26:38Z
dc.date.issued2018-11
dc.description.abstractThe evolutionary history of the wolf-like canids of the genus Canis has been heavily debated, especially regarding the number of distinct species and their relationships at the population and species level [1, 2, 3, 4, 5, 6]. We assembled a dataset of 48 resequenced genomes spanning all members of the genus Canis except the black-backed and side-striped jackals, encompassing the global diversity of seven extant canid lineages. This includes eight new genomes, including the first resequenced Ethiopian wolf (Canis simensis), one dhole (Cuon alpinus), two East African hunting dogs (Lycaon pictus), two Eurasian golden jackals (Canis aureus), and two Middle Eastern gray wolves (Canis lupus). The relationships between the Ethiopian wolf, African golden wolf, and golden jackal were resolved. We highlight the role of interspecific hybridization in the evolution of this charismatic group. Specifically, we find gene flow between the ancestors of the dhole and African hunting dog and admixture between the gray wolf, coyote (Canis latrans), golden jackal, and African golden wolf. Additionally, we report gene flow from gray and Ethiopian wolves to the African golden wolf, suggesting that the African golden wolf originated through hybridization between these species. Finally, we hypothesize that coyotes and gray wolves carry genetic material derived from a “ghost” basal canid lineage.pt_PT
dc.description.versioninfo:eu-repo/semantics/publishedVersionpt_PT
dc.identifier.doi10.1016/j.cub.2018.08.041pt_PT
dc.identifier.urihttp://hdl.handle.net/10451/62225
dc.language.isoengpt_PT
dc.peerreviewedyespt_PT
dc.publisherElsevierpt_PT
dc.relationDanish National High-Throughput Sequencing Centrept_PT
dc.relationDanish National Supercomputer for Life Sciences, Computeromept_PT
dc.relationQimmeq project funded by The Velux Foundations and Aage og Johanne Louis-Hansens Fond; Carlsbergfondet grant CF14–0995pt_PT
dc.relationMarie Skłodowska-Curie Actions grant 655732-WhereWolfpt_PT
dc.relationMarie Skłodowska-Curie Actions grant 676154-ArchSci2020pt_PT
dc.relationDanish National Research Foundation grant DNRF94pt_PT
dc.relationLundbeckfonden grant R52–5062pt_PT
dc.relationERC Consolidator grant 681396-Extinction Genomicspt_PT
dc.relationUniversities of Oslo and Copenhagen for a PhD stipendpt_PT
dc.relationMINECO/FEDER, UE, grant BFU2017-86471-Ppt_PT
dc.relationNIMH grant U01 MH106874, a Howard Hughes Medical Institute International Early Career grant, Obra Social “La Caixa,” and Secretaria d’Universitats i Recerca and CERCA Programme del Departament d’Economia i Coneixement de la Generalitat de Catalunyapt_PT
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/4.0/pt_PT
dc.titleInterspecific Gene Flow Shaped the Evolution of the Genus Canispt_PT
dc.typejournal article
dspace.entity.typePublication
oaire.citation.endPage3449.e5pt_PT
oaire.citation.issue21pt_PT
oaire.citation.startPage3441pt_PT
oaire.citation.titleCurrent Biologypt_PT
oaire.citation.volume28pt_PT
person.familyNameFernandes
person.givenNameCarlos
person.identifier.ciencia-idF413-49F5-CA96
person.identifier.orcid0000-0002-1386-8103
person.identifier.ridJ-3045-2013
person.identifier.scopus-author-id8966321900
rcaap.rightsopenAccesspt_PT
rcaap.typearticlept_PT
relation.isAuthorOfPublication85288c51-371a-4260-9f02-4834fd136534
relation.isAuthorOfPublication.latestForDiscovery85288c51-371a-4260-9f02-4834fd136534

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